Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887360.1_cds_XP_016441675.1_37011
CDS Infomation

[gene=LOC107767268] [db_xref=GeneID:107767268] [protein=pectate lyase-like] [protein_id=XP_016441675.1] [location=join(14971..15170,15533..16181,16264..16506,16607..16834)] [gbkey=CDS]
Sequence

ATGGCCTTTGTTAGTGGGAATTCAGTTTTGTTAATATTGGTCATATCGTTAGCTTCATTA
GTCCCAAATTTGCATGCCGGAATTGCTGAATTTGATGCATATTTGGAAAAGCAAGCTAAG
GAAGCGCTCAACTCTTCCCTTGCTGCATACAATGAACATCCTGAAGAAATCACTGATACA
TTCAATAGAGAAGTCGGAGACACATTGTTGAATATTACAAGCTTAAGGAGGCATCTAAAG
GAAAAAAGTAGTTGCATGGCAACCAATCCAATTGACAGATGCTGGAGGTGTGACGAAAAC
TGGGCGAAAAACAGGAAAAAGCTAGCAGAATGCGCTCGGGGATTCGGCCACAAAACGACT
GGTGGTAAAGCAGGAAGGTACTATGTTGTAACCGATGACTCGGATGATGACGTGAAGGAT
CCAAAGCCGGGGACCCTTCGTCATGCTGTGATCCAAGAGGAGCCATTGTGGATTATCTTT
GAGAAGTCAATGGTAATTAAGTTGAAGGAAGAACTGATGATTACAAGTGACAAGACGATC
GATGGCAGGGGAGTTTCTATTTACATTGCCTATGGCGCTGGTTTAACTATCCAATTTGTG
CATAATGTCATAATCCACAACATTAGGATTCATCATATTATATCTACCTCAGGTGGAATG
ATAAGAGATTCTGTTAAGCATATTGGTATTAGGACACTGAGTGATGGAGATGGTATTTCT
ATTTTTGGTTCAAACCATATTTGGATTGACCACTGCACTTTGTCCCAATGTACTGATGGC
CTAATTGATGCCATCATGGCTTCCACTGCAATCACCATTTCTAACTGCAAATTCAATCAT
CATAACGACGTGATGCTTTTGGGGGCAACTGATGCCTTCCCTCAAGATTCAATAATGCAA
GTCACAGTTGCATTCAATCGGTTCGGAAAGGGATTGATTCAGAGGATGCCAAGGTGCAGG
TGGGGATTCTTCCATGTTGTCAACAATGATTACTCTCACTGGCAAATGTATGCAATTGGT
GGCAGCGCTAATCCAACCATTATCAGCCAGGGTAATCGTTTCAAGGCCGCCAACAACCCT
AACACTAAGCAGGTGACTAAGAGGGATTATGCACCAGAATCTGTGTGGAAGAACTGGCAA
TGGGTATCAGAGGGTGATTTGTTCTTAAATGGGGCTTACTTTGTGGAGTCAGGGCCACAA
AACAAGAAAAATTCTGCATTGACTAAACCTCATAGGATCAAGTTCAAGCCTGGTTCATAT
GCAGGCCGACTCACTCGCTATGCTGGTGTGCGCAAATGCAAAATCGGCACACCTTGTTAA

Peptide Sequence

PEP ID

XP_016441675.1
PEP Infomation

PREDICTED: pectate lyase-like [Nicotiana tabacum]
Sequence

MAFVSGNSVLLILVISLASLVPNLHAGIAEFDAYLEKQAKEALNSSLAAYNEHPEEITDT
FNREVGDTLLNITSLRRHLKEKSSCMATNPIDRCWRCDENWAKNRKKLAECARGFGHKTT
GGKAGRYYVVTDDSDDDVKDPKPGTLRHAVIQEEPLWIIFEKSMVIKLKEELMITSDKTI
DGRGVSIYIAYGAGLTIQFVHNVIIHNIRIHHIISTSGGMIRDSVKHIGIRTLSDGDGIS
IFGSNHIWIDHCTLSQCTDGLIDAIMASTAITISNCKFNHHNDVMLLGATDAFPQDSIMQ
VTVAFNRFGKGLIQRMPRCRWGFFHVVNNDYSHWQMYAIGGSANPTIISQGNRFKAANNP
NTKQVTKRDYAPESVWKNWQWVSEGDLFLNGAYFVESGPQNKKNSALTKPHRIKFKPGSY
AGRLTRYAGVRKCKIGTPC

Transcript Sequence

Gene sequence data has not been registered.